The Snail protein functions as a transcriptional regulator to establish early mesodermal cell fate. Later, in germ band‐extended embryos, Snail is also expressed in most neuroblasts. Here we present evidence that this expression of Snail is required for central nervous system (CNS) development. The neural function of snail is masked by two closely linked genes, escargot and worniu. Both Escargot and Worniu contain zinc‐finger domains that are highly homologous to that of Snail. Although not affecting expression of early neuroblast markers, the deletion of the region containing all three genes correlates with loss of expression of CNS determinants including fushi tarazu, pdm‐2 and even‐skipped. Transgenic expression of each of the three Snail family proteins can rescue efficiently the fushi tarazu defects, and partially the pdm‐2 and even‐skipped CNS patterns. These results demonstrate that the Snail family proteins have essential functions during embryonic CNS development, around the time of ganglion mother cell formation.
The snail (sna) mutant was first identified in a large‐scale screening for genes involved in embryonic patterning (Nusslein‐Volhard et al., 1984). Embryos that are homozygous for loss‐of‐function mutations of sna exhibit defects in gastrulation, mesoderm formation and germ band retraction (Simpson, 1983; Grau et al., 1984; Nusslein‐Volhard et al., 1984). sna expression is detected first in the ventral cells of the blastoderm stage embryo (Alberga et al., 1991; Kosman et al., 1991; Leptin, 1991). This ventral expression has been proposed to define the limit and to direct the invagination of the ventral presumptive mesoderm. The Sna protein contains five zinc fingers and functions as a DNA‐binding transcriptional regulator (Boulay et al., 1987; Ip et al., 1992a; Kasai et al., 1992; Mauhin et al., 1993). In the blastoderm stage embryo, Sna prevents the mixing of cell fates by directly repressing neuroectodermal genes such as rhomboid and single‐minded in the mesodermal territory (Kosman et al., 1991; Leptin, 1991; Ip et al., 1992a). Sna may also regulate other target genes that are important for ventral cell invagination (Ip et al., 1994a; Casal and Leptin, 1996; Hemavathy et al., 1997).
The expression of Snail disappears from the mesoderm ∼30 min after invagination, then reappears in the neuroectoderm (Alberga et al., 1991; Kosman et al., 1991; Leptin, 1991; Ip et al., 1994b). Drosophila embryonic nervous system development starts with groups of cells, proneural clusters, in the neuroectoderm that acquire the competence to become neural precursors (Campos‐Ortega, 1993; Goodman and Doe, 1993). This initial determination depends on genes such as ventral nervous system defective (vnd), intermediate neuroblasts defective (ind), muscle segment homeobox (msh) and those in the achaete–scute complex (Isshiki et al., 1997; Campos‐Ortega, 1998; Chu et al., 1998; McDonald et al., 1998; Weiss et al., 1998). Through the process of lateral inhibition (Bhat, 1998a; Rooke and Xu, 1998), a cell within each proneural cluster is selected to become the neuroblast, which then delaminates into the interior of the embryo. Neuroblasts function as stem cells of the nervous system. They divide repeatedly and asymmetrically to produce another neuroblast and a ganglion mother cell (GMC). The GMC divides once more to produce a pair of post‐mitotic neurons. The fate of GMCs and postmitotic neurons follows a well‐defined pattern depending on the input of many genes (Campos‐Ortega, 1993; Goodman and Doe, 1993; Doe and Skeath, 1996).
By the time of neuroblast delamination, Sna is present in most of the neuroblasts that have segregated from the ectoderm. Despite the extensive expression in the neuroblasts, Sna had no known function in the developing nervous system (Alberga et al., 1991; Kosman et al., 1991; Leptin, 1991; Roark et al., 1995).
The neuroblast pattern of sna resembles that of a group of genes called pan‐neural genes (Bier et al., 1992; Roark et al., 1995). One of these genes, scratch (scrt), encodes a protein that has sequence similarity to Sna in the zinc‐finger domain (Roark et al., 1995). Mutations of scrt have no obvious phenotype except that viable escapers have morphological defects in the eyes. Furthermore, no nervous system defect can be seen in sna scrt double mutants (Roark et al., 1995). On the other hand, the scrt dpn double mutants [deadpan (dpn) is another pan‐neural gene that encodes a basic helix–loop–helix protein (Bier et al., 1992)] exhibit some defects in nervous system development (Roark et al., 1995). Therefore, scrt does have a function in the central nervous system (CNS), but the function of sna, if any, in the nervous system does not overlap with that of scrt.
Escargot (Esg) is another protein that contains five zinc fingers with sequences highly homologous to those of Sna (Whiteley et al., 1992). The expression of esg is rather dynamic during embryonic development. The gene is expressed in the epidermis, neuroectoderm and imaginal precursor cells. Previous findings (Hayashi et al., 1993; Fuse et al., 1994, 1996) demonstrated that the Esg protein probably acts through the cdc2 kinase to maintain the proper cell cycle in larval imaginal disc cells; in esg mutant larvae the imaginal disc cells lose their diploidy as they re‐enter the S phase without going through mitosis. Moreover, esg and sna are both expressed in the embryonic wing imaginal disc primodia and the two genes have redundant functions in this tissue; the vestigial marker gene expression in the disc is lost in esg sna double mutants. Despite a clear demonstration of the redundant requirements of sna and esg in the wing disc, the double mutant was reported to have no significant embryonic CNS phenotype (Fuse et al., 1996). Thus, the function of sna in nervous system development has remained a mystery.
We have identified from the Berkeley Drosophila Genome Project database a novel gene that encodes a protein with a zinc‐finger domain highly homologous to those of Sna and Esg. Based on the sequence homology and the functional relationship to sna and esg, we have named this gene worniu (pronounced war‐niu, Chinese for snail). RNA in situ hybridization reveals extensive expression of worniu (wor) in the developing nervous system. wor is located between esg and sna, ∼100 kb apart, in the 35D region of the second chromosome. Deletions that uncover all three genes exhibit severe reduction of the expression of CNS markers, including fushi tarazu (ftz), POU domain protein‐2 gene (pdm‐2) and even‐skipped (eve). At later stages the mutant embryos also have highly reduced axonal structure. Transgenic expression of Sna, Wor or Esg can each rescue efficiently the early CNS defects, particularly the ftz pattern, and partially the late defects. Since many early neuroblast marker expressions are normal in the deletion mutants, the Sna family proteins probably function around the stage of GMC formation. Sna homologs have been identified in many different species (Sargent and Bennett, 1990; Nieto et al., 1992, 1994; Smith et al., 1992; Hammerschmidt and Nusslein‐Volhard, 1993; Jiang et al., 1998; Sefton et al., 1998). The demonstration of an essential function of Sna family proteins in Drosophila nervous system development may also provide a novel avenue to study neurogenesis in vertebrates.
Worniu is a novel member of the Snail family proteins
We searched for genes that had sequence homology to Sna in the Berkeley Drosophila Genome Project database. The search resulted in the identification of one such gene (in P1 clone DS03023), which we named worniu (wor). Using the genomic sequence information, we isolated full‐length cDNA from early embryonic libraries. Sequence comparison between the genomic and complementary DNA (DDBJ/EMBL/GenBank accession No. AF118857) reveals that the gene contains only one small intron located in the 5′ end of the protein coding region. The putative Wor protein sequence contains a C‐terminal domain with six zinc fingers that are very similar to those of Sna and Esg, even though those proteins contain only five fingers (Figure 1). The N‐terminal halves of these proteins have rather divergent sequences, except that they all contain a conserved basic motif (shaded) very close to the N‐termini. The function of this motif is not known. Moreover, the proteins contain two P‐DLS‐K motifs (shaded boxed in Figure 1). The P‐DLS‐K domains in Sna have been shown to interact with the Drosophila C‐terminal binding protein (dCtBP) and to play important roles in transcriptional repression (Nibu et al., 1998a,b; Poortinga et al., 1998). Since all three Sna family proteins contain highly homologous corepressor‐interacting and DNA‐binding domains, and can bind to similar DNA sequences (data not shown; Ip et al., 1992a; Kasai et al., 1992; Mauhin et al., 1993; Fuse et al., 1994), it is possible that they bind to promoters of overlapping sets of target genes and repress transcription.
wor expresses extensively in neuroblasts, similar to sna
The wor cDNA was used to prepare an antisense RNA probe for embryo in situ hybridization in order to study the spatial and temporal expression patterns. While there is no maternal RNA deposition, zygotic expression can be detected first at the onset of neurogenesis. At late stage 8, wor transcript can be observed in two small patches of cells in the dorsal head region anterior to the cephalic furrow, representing precursor cells of the developing brain (Figure 2A). At stage 9, wor expresses in the first wave of delaminating neuroblasts along either side of the midline (Campos‐Ortega, 1993; Goodman and Doe, 1993), as well as in cells in the head region (Figure 2B–D). Later in the germ band‐extended embryo, most of the neuroblasts contain wor RNA (Figure 2E). This pattern greatly resembles that of sna at this stage of development (Figure 2G), except that sna expression in some of the centrally located neuroblasts in each hemisegment is at lower levels (Figure 2G, arrow). In later stages, wor continues to express in the brain and part of the ventral nerve cord (Figure 2F). We did not detect expression of wor in any other embryonic tissue.
There is no extensive expression of esg in the neuroblasts similar to that shown for wor or sna. However, it has been demonstrated that esg RNA is expressed in the ventral neuroectoderm (Whiteley et al., 1992; Yagi et al., 1998). Careful examination of the expression reveals that esg transcript is probably present in the CNS, albeit at variable levels (Figure 2H, arrowheads). Based on the expression analyses, we hypothesized that the newly identified wor might serve a redundant function with that of sna or esg during neural development. This would explain why neither single nor double mutants of sna and esg showed severe defects in the nervous system.
Deletion of the sna family genes correlates with CNS developmental defects
To test the hypothesis that the Sna family proteins function redundantly in the developing nervous system, we analyzed the neural phenotype associated with a deletion that uncovers all three genes. wor is located between esg and sna, ∼100 kb apart, in the 35D region of the second chromosome [Berkeley Drosophila Genome Project (FlyBase, 1999)]. We took advantage of the close proximity of these genes and examined the phenotypes in the Df(2L)osp29 mutant (Df: 35B1–35E6). Since high levels of Sna and Wor are present in the neuroblasts, we first analyzed the expression of the proneural gene achaete, which marks a subset of early delaminating neuroblasts. This expression is not affected in the osp29 deletion mutants (Figure 3A and B). The expression patterns of additional neuroblast markers including hunchback (hb), dpn, scrt (Figure 3C–H) and lethal of scute (data not shown) also are similar in wild‐type and mutant embryos. The slight abnormality of the expression patterns is probably due to the gastrulation defect associated with the sna mutation. Therefore, the early waves of neuroblast delamination are normal in the absence of the Snail family proteins.
We then examined the CNS patterns of GMC markers ftz, pdm‐2 and eve. ftz is expressed in a number of midline precursor cells and extensively in GMC (Doe et al., 1988b). In contrast to the neuroblast markers, the ftz expression is almost abolished in the mutant embryo (Figure 3I and J). The pdm‐2 gene is also expressed in some neuroblasts and GMC. The early neuroblast expression of pdm‐2 in the mutant is rather normal (data not shown), while the expression in later staged embryos is highly defective (Figure 3K and L). eve gene products are present in a number of GMC and postmitotic neurons during normal development. We find that all the eve CNS expression is absent in homozygous osp29 deletion mutant embryos (Figure 3M and N). Taken together, the deletion mutant that uncovers the three sna family genes shows severe defects in CNS development.
The nervous system phenotype of the deletion mutant at late stages of embryogenesis was evaluated by staining of different neural markers as illustrated in Figure 4. Staining with BP102, a monoclonal antibody recognizing all CNS axon scaffold and commissures (Seeger et al., 1993), reveals that Df(2L)osp29 homozygous embryos have a severe disruption in CNS formation (Figure 4A and B). Similar results can be observed with the BP106 antibody (Figure 4C and D), which recognizes the CNS transmembrane glycoprotein neurotactin (Hortsch et al., 1990), and the 22C10 antibody (Figure 4E and F), which stains a subset of cell bodies and axons in the CNS and peripheral nervous system (PNS) (Fujita et al., 1982). It is worth noting that sna− embryos exhibit both gastrulation and germ band retraction phenotypes. Such morphological abnormality renders some difficulty in the analysis of the CNS phenotype in late stage embryos. However, the CNS shows only minor defects in embryos that are mutated for sna alone (see Figure 6B), demonstrating that the CNS phenotype in Df(2L)osp29 homozygotes is not solely due to the gastrulation defect. Rather, it is because of the deletion of genes other than or in addition to sna.
Sna‐related proteins have collaborative functions in CNS development
Since the osp29 deletion uncovered a large region, we tested whether the observed CNS defect was a result of deleting the zinc‐finger genes or other unrelated genes. We first performed RNA in situ hybridization on embryos obtained from deficiency strains with break points in the division 35 region (Ashburner et al., 1990) to assay for the expression of esg, wor and sna (Figure 5). We then studied the correlation of CNS phenotype with various deletions by examining the expression of both eve RNA and BP102 antigen. Deletions that remove distally located genes including esg, or those that remove proximally located genes including sna do not exhibit CNS phenotype stronger than those of sna mutants. On the other hand, four deletions [Df(2L)osp29, Df(2L)do‐1, Df(2L)A48 and Df(2L)TE35BC‐24] that all uncover the three genes exhibit the severe neural defects already described for Df(2L)osp29. These results show a clear correlation of the CNS phenotype with the deletion of the region between esg and sna.
The Df(2L)noc4LScorv9R extends from the distal direction (Ashburner et al., 1990) and deletes both esg and wor but not sna (Figure 5). The expression of CNS markers is normal in this mutant (Figure 6E and F), demonstrating that the function of wor by itself is not essential for CNS development. The deletion Df(2L)TE35D‐22 extends from the proximal direction and uncovers both sna and wor but not esg. These mutant embryos, however, have much reduced eve expression and CNS axonal structure (Figure 6G and H). This phenotype was less severe than that seen in esg− wor− sna− embryos (compare with Figures 3N and 4B). Another line of evidence that supports the involvement of Sna family proteins is the RI1 deletion. This mutant exhibits slightly reduced RNA expression of both sna and wor at late stages, while esg expression is undisturbed. This reduced expression of wor and sna correlates with a slightly abnormal eve CNS expression (Figure 5), again supporting the idea that reducing both wor and sna activities can lead to abnormal development of the nervous system.
We also compared in detail the neural phenotypes of esg and sna point mutants. The esg mutant embryos have CNS morphology indistinguishable from that of wild type (data not shown) (Fuse et al., 1996). The sna mutant has almost normal eve expression and slightly defective ventral nerve cord formation (Figure 6A and B). This mild phenotype may be an indirect result of the gastrulation defects associated with sna mutants. In the double mutant, eve expression (Figure 6C) appears to be similar to that of sna− (Fuse et al., 1996), but the BP102 staining reveals a more severe morphological disruption of the nervous system (Figure 6D). Point mutation of wor has not been identified, thus the phenotypes of other double mutants await future investigation. Taken together, the results are consistent with the hypothesis that the CNS functions of individual sna family genes can be compensated by the other two. Deleting two of the three genes, particularly wor and sna, at the same time can lead to a rather severe neural phenotype.
Transgenic expression of Sna, Wor or Esg rescues early CNS defects
To confirm the function of these three proteins in neural development, we constructed transgenic rescue plasmids in which individual genes (esg, wor or sna) were placed under the control of a 2.8 kb sna promoter, which contains an enhancer element that directs expression in the neuroblasts (Ip et al., 1992b, 1994b). The transgenic flies obtained were then crossed with the osp29 strain and analyzed for CNS development. In the presence of any one of the three constructs the ftz expression is restored significantly (Figure 7D–F), in contrast to the almost complete loss of expression in embryos from the parental mutant line (Figure 7B and C). Analysis of the rescued pattern under higher magnification reveals that part of the ftz staining is clearly absent. However, more detailed analysis is required to pinpoint the exact cell lineages that are missing. Nevertheless, the results demonstrate that each of the three sna family genes can perform essential functions in the CNS in the absence of the other two.
The rescue of the expression of pdm‐2 and eve, both of which were defective in the osp29 mutant, by the transgenes was also examined. While all three sna family genes clearly can rescue the expression of pdm‐2 (Figure 8C–E), the effect is not as extensive compared with that of ftz. For eve RNA, the transgenes rescue the expression in a significant number of cells when compared with the total loss of expression in the parental osp29 mutant (Figure 8G–J). The rescue of eve, again, is not as extensive as that of ftz. Later stage CNS morphology in the rescued embryos was also monitored by BP102 staining. The embryos carrying the transgenes have slightly better overall CNS axonal morphology (Figure 8M and N), but they are still highly abnormal when compared with the wild type.
We also performed pairwise recombination of the transgenes and tested whether they could achieve better rescue. By staining embryos obtained from stable lines that are homozygous for two transgenes, we found that the constructs direct the expression of ftz slightly better (compare Figure 7I with E and F). Meanwhile, the eve and BP102 antigen expression in the presence of two transgenes reveals only minor improvement of the axonal morphology (Figure 8K, L and N). These results suggest that the three proteins may have some collaborative function. It is also possible that the promoter used has limitation in driving the rescue transgenes or that there are additional genes involved for the severe CNS phenotype.
We have identified in Drosophila a gene encoding a zinc‐finger protein highly homologous to Sna. This gene is also closely linked to sna and esg on the left arm of the second chromosome. We have named this gene worniu, based on the functional and structural relationship to both sna and esg. Experimental results demonstrate that wor, sna and esg participate in neurogenesis. The simultaneous loss of function of all three genes correlates with severe defects in neural development. By transgenic rescue assays, we show that this family of proteins act early to determine neural cell fate, around the time of GMC formation.
The identification of the novel gene wor was a critical step that led to the elucidation of the function of the sna family in CNS development. Not only does wor code for a protein that contains a homologous zinc‐finger domain, it also expresses in the developing CNS. The expression pattern greatly resembles that of sna, suggesting a possible functional redundancy. A series of experiments designed to test this hypothesis demonstrated that these genes indeed are important during neurogenesis. First, deletions that simultaneously uncover all three genes exhibit severe CNS developmental defects, and these CNS defects map to within a 200 kb region containing these three genes. Secondly, while sna or esg mutation does not show a severe neural phenotype, deleting two out of the three genes could result in varying degrees of CNS developmental defects. Thirdly, the expression in transgenic flies of the three genes individually is sufficient to rescue at least part of the CNS defects.
While the CNS defects exhibited in the deletion mutants can be restored by the transgenes, the rescue, particularly the late phenotypes such as the axonal structures, is not complete. These results are consistent with the idea that Sna family proteins function at an early stage of neural development and that late patterns are farther downstream, and therefore less efficiently rescued. Previous genetic analyses demonstrated that at least in the RP2 neuronal lineage ftz acts upstream of pdm‐2 and eve (Doe et al., 1988a,b; Bhat and Schedl, 1994; Bhat et al., 1995; Chu‐LaGraff et al., 1995; Yeo et al., 1995). Therefore, ftz is probably a proximal genetic target in the hierarchy downstream of the Sna family proteins, and it is possible that ftz functions upstream of other genes including pdm‐2 and eve to control the development of multiple neuronal lineages. Such a hypothesis does not exclude the possibility that the Sna family also regulates other neural determinants in addition to ftz at the stage of GMC formation (Figure 9).
The lack of complete rescue by the transgenes may also be due to the limitation of the sna promoter used. The 2.8 kb promoter, although it has been shown to direct the expression of lacZ (Ip et al., 1992b, 1994b) and the transgenes (data not shown) in many neuroblasts, may not have driven the transgenic protein products at sufficiently high levels or at later stages required for late gene expression. A third possibility is that there may be additional genes responsible for the neural phenotypes observed in the deletion mutants. If these additional genes exist, they must be located within the region uncovered by the do‐1/TE35D‐22 transheterozygote (Figure 5) and probably between esg and sna.
Although individual expression of the three genes can rescue the CNS phenotype, we suggest collaborative, but not strictly redundant, functions of the three genes. This is because if they are redundant, the presence of any one of them should be equally efficient to direct CNS development. However, the expressivity of the different mutant combinations is rather variable (Figure 5). The rescue experiments also reveal that the transgenic sna functions a little better than the transgenic wor and esg. Furthermore, the expression of endogenous esg in the CNS is not as extensive as the other two genes. Therefore, sna is playing a more significant role, while wor is somewhat less efficient and esg the least important in CNS development. Nonetheless, the genetic rescue experiments demonstrate that all three can control neural differentiation. A similar collaborative role of several proteins in CNS development has precedence in the achaete–scute complex function (Jimenez and Campos‐Ortega, 1990; Parras et al., 1996; Skeath and Doe, 1996), in pdm‐1‐ and pdm‐2‐dependent regulation (Bhat and Schedl, 1994; Bhat et al., 1995; Yeo et al., 1995), and in the frizzled receptors' mediation of wg signaling (Bhat, 1998b).
We have attempted to test the role of the pan‐neural gene scrt by crossing the scrt mutant to the osp29 deletion background. Unfortunately, no stable fly line could be established. Based on the sequence homology, however, scrt is less closely related to the three sna family genes. Furthermore, in the deletion mutants where scrt is intact, the expression patterns of ftz, pdm‐2 and eve are mostly, if not totally, abolished. This shows that scrt alone cannot direct the expression of these markers in the absence of the other three genes. If Scrt collaborates with the other zinc‐finger proteins in neurogenesis, the effect should be subtle.
Increasing numbers of sna‐related genes have been identified in diverse species (Sargent and Bennett, 1990; Nieto et al., 1992, 1994; Smith et al., 1992; Hammerschmidt and Nusslein‐Volhard, 1993; Jiang et al., 1998; Sefton et al., 1998). These proteins have been assigned to the Sna family based mostly on the similarity of the sequences in the zinc‐finger domains. The expression patterns and some functional studies of the vertebrate proteins suggest a role in regulating cell movement (Hammerschmidt and Nusslein‐Volhard, 1993; Nieto et al., 1994; Savagner et al., 1997; Sefton et al., 1998). However, gene knock‐out experiments demonstrated that mutating a mouse Slug homolog did not lead to a detectable cell movement defect (Jiang et al., 1998). Such a result suggests a possible redundant function provided by other genes, similar to our report here. If the vertebrate homologs do have a function in controlling cell movement, it would be reminiscent of the control of cell movement during gastrulation by the Drosophila Sna. The expression of vertebrate Sna proteins in developing CNS, however, has not been demonstrated. A careful examination of the expression and function in the CNS is needed to reveal the importance. The analysis of the functions of Sna, Esg and Wor in Drosophila CNS development will certainly provide a foundation for similar analysis in other species.
Materials and methods
Drosophila stocks and genetics
Fly stocks were maintained at 24°C using standard cornmeal–yeast–agar medium. The y w67 stock was used for all P element transformation. Microinjection was performed using the Δ2‐3 transposase helper plasmid, and the genetic crosses that established the rescue lines were as described previously (Ip et al., 1994a; Hemavathy et al., 1997). The recombination of the transgenic chromosomes was carried out by crossing the transgenic y w67 stocks pairwisely. Female flies that were transheterozygous for the two transgenes were collected and mated with third‐chromosome balancer male flies. Male offspring that had a dark red eye color were collected and mated with balancer stocks. These potential recombinants were confirmed by in situ hybridization analysis of the expression patterns ectopically in the mesoderm for wor and esg, or by genetic rescue for sna. The genetic analysis of wor, sna and esg utilized the lines shown in Table I. In addition, the snaIIG05, esg35Ce single mutants and snaHG31 esgG66B double mutant were used in the experiments. The details of the mutations are available on FlyBase (FlyBase, 1999), and in Fuse et al. (1996), Lindsley and Zimm (1992) and Ashburner et al. (1990).
Plasmids and cloning of worniu cDNA
A DNA fragment of wor was obtained by PCR amplification of an embryonic cDNA library (Brown and Kafatos, 1988) using primers based on the genomic sequence that contains the putative coding region of wor (P1 clone DS03023). The fragment was sequenced to confirm its identity and used as a probe for cloning cDNA from the library. The cDNA was sequenced completely and one intron was found in the 5′ coding region when compared with the genomic sequence. The cDNA sequence has been deposited in DDBJ/EMBL/GenBank under the accession No. AF118857.
Plasmids for transgenic rescue were constructed by sub‐cloning the coding regions of wor, sna, or esg into the pCaSpeR vector. This vector had been modified such that a 2.8 kb sna promoter region was inserted into the BamHI and KpnI sites of the pCaSpeR‐AUG‐β‐gal vector (Thummel and Pirrotta, 1992) and this is called pCaSpeR‐Snailp (Ip et al., 1992b). The cDNA fragments were then cloned into the pCaSpeR‐Snailp to replace the lacZ gene coding sequence. The sna cDNA fragment was isolated from a pPAct5C‐sna cDNA by digesting with KpnI and BglII (blunted), and cloned into the KpnI and XbaI (blunted) sites of the transformation vector. For esg, plasmid pPAesg (kindly provided by S.Hayashi) was cut with XbaI, filled in to blunt and then cut with EcoRV. The 1.6 kb fragment carrying the esg gene was then cloned into the Asp718‐ and XbaI‐digested, and T4 polymerase‐blunted pCaSpeR‐Snailp vector. The wor gene fragment was obtained from the pG3Act5C‐worniu, which was cut with BglII, filled in to blunt and then digested with KpnI. The 1.6 kb fragment was then cloned into the KpnI and XbaI (blunted) sites of pCaSpeR‐Snailp.
Embryo in situ hybridization
RNA in situ hybridization was performed as described previously (Hemavathy et al., 1997). Briefly, in vitro transcription was performed in the presence of digoxigenin‐UTP (Dig‐U) to synthesize Dig‐U‐labeled RNA from a linearized plasmid template. Fixed embryos were hybridized with Dig‐U‐labeled RNA overnight, and then incubated with alkaline phosphatase‐conjugated anti‐digoxigenin antibodies. The signal was developed using the alkaline phosphatase reaction.
Immunohistochemical staining of embryos
Localization of expressed proteins or CNS antigens was monitored by staining embryos with monoclonal antibodies that are specific for their corresponding epitopes. Embryos collected on apple/grape juice plates were dechorionated in fresh Chlorox for 3 min and washed thoroughly with water and Triton X‐100/NaCl (0.1%/0.1 mM). Embryos were then transferred to 3.6 ml of buffer B (10 mM KPO4 pH 6.8, 15 mM NaCl, 45 mM KCl, 2 mM MgCl2). After addition of 0.4 ml formaldehyde (37%) and 4 ml of heptane, the embryos were vigorously shaken for 12 min. The bottom layer of buffer and formaldehyde was then removed. Eight milliliters of methanol were added and the embryos were once again shaken vigorously for 1 min. Then the top heptane layer was removed and the devitellinized embryos that settled to the bottom were washed with methanol four times and stored at 4°C until staining.
Antibody staining was performed by first blocking the embryos in 5% milk in 1× phosphate‐buffered saline (PBS) for ∼3 h. Primary antibody was diluted in 1× PNMT (1× PBS, 500 mM NaCl, 0.5% milk, 0.1% Tween) and embryos incubated in 1:50 primary antibody overnight at 4°C. The next morning, the embryos were washed with 1× PNMT by nutating at room temperature four times each for ∼30 min. Biotinylated anti‐mouse secondary antibody was diluted 1:400 in PNMT and added to the embryos for overnight incubation at 4°C. Embryos were then washed six times in 1× PNMT each for ∼30 min. Biotin–streptavidin–horseradish peroxidase complex (Vectastain ABC kit, Elite; Vector Laboratories, Inc., CA) was first formed by adding the individual solutions together ∼30 min prior to mixing with the embryos. The complex containing solution was incubated with the embryos at room temperature for 1 h. Embryos were then washed eight times in PBT (1× PBS, 0.1% Tween) each for 5 min. The signal was developed by incubation with DAB in the presence of H2O2. The reaction was terminated by washing the embryos with PBT and then with ethanol. The embryos were rinsed with ethanol and xylene, and then mounted in Permount (Fisher) for microscopy.
We thank the Berkeley Drosophila Genome Project for making the sequence data available, S.Hayashi for esg DNA and esg sna double mutant flies, and K.Bhat, C.Doe, M.P.Martin, J.Zhou and K.White for mutant stocks and DNA. The BP102 and BP106 monoclonal antibodies developed by C.Goodman and 22C10 by S.Benzer were obtained from the Developmental Studies Hybridoma Bank developed under the auspices of the NICHD and maintained by The University of Iowa, IA. We are indebted to M.Ashburner, J.Nambu and L.Zeng for comments on the manuscript, and to S.Misra for sequence data and analysis. The work from Y.T.I.'s laboratory was supported by a grant from NIH, a Scholar award from the Leukemia Society of America and a research grant from the March of Dimes Birth Defects Foundation. J.R. was supported by an MRC Programme Grant to M.Ashburner, S.Russell and D.Gubb.
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